Skip to main content
Ctrl+K
Infinity-Tomographic-Reconstruction 0.1.0 documentation - Home

Site Navigation

  • Installation
  • Examples
  • API reference
  • Please cite
  • GitHub

Site Navigation

  • Installation
  • Examples
  • API reference
  • Please cite
  • GitHub

Section Navigation

  • toor package
    • toor.AnalyticalReconstruction package
    • toor.CalibrationWrapper package
    • toor.Corrections package
      • toor.Corrections.CT package
        • toor.Corrections.CT.Projector package
      • toor.Corrections.DualRotation package
        • toor.Corrections.DualRotation.Normalization package
        • toor.Corrections.DualRotation.SystemFocus package
      • toor.Corrections.General package
      • toor.Corrections.PET package
        • toor.Corrections.PET.Attenuation package
        • toor.Corrections.PET.DOI package
        • toor.Corrections.PET.DecayCorrection package
        • toor.Corrections.PET.EnergyCorrection package
        • toor.Corrections.PET.Projector package
    • toor.Designer package
    • toor.DetectionLayout package
      • toor.DetectionLayout.Collimators package
      • toor.DetectionLayout.Modules package
      • toor.DetectionLayout.Photodetectors package
        • toor.DetectionLayout.Photodetectors.Crystals package
        • toor.DetectionLayout.Photodetectors.SiPM package
      • toor.DetectionLayout.RadiationProducer package
      • toor.DetectionLayout.Semicondutors package
    • toor.Device package
    • toor.GateLink package
      • toor.GateLink.GateToTor package
      • toor.GateLink.RootToTor package
      • toor.GateLink.ToRToGate package
    • toor.Geometry package
      • toor.Geometry.LinearPET package
      • toor.Geometry.Standard package
      • toor.Geometry.dualRotationBased package
    • toor.ImageReader package
      • toor.ImageReader.DICOM package
      • toor.ImageReader.Interfile package
      • toor.ImageReader.RawData package
    • toor.Optimizer package
    • toor.Quantification package
    • toor.TORFilesReader package
  • API reference
  • toor package
  • toor.GateLin...

toor.GateLink package#

Subpackages#

  • toor.GateLink.GateToTor package
    • Submodules
    • toor.GateLink.GateToTor.GateToTor module
    • toor.GateLink.GateToTor.MacParser module
      • GATEMacParser
        • GATEMacParser.get_fields()
        • GATEMacParser.replace_field()
        • GATEMacParser.save()
    • Module contents
  • toor.GateLink.RootToTor package
    • Submodules
    • toor.GateLink.RootToTor.addanglestorootfile module
      • AddMotorInfoToRoot
        • AddMotorInfoToRoot.createMotorArrays()
        • AddMotorInfoToRoot.readMotorFiles()
        • AddMotorInfoToRoot.saveMotorArraysIntoRoot()
    • toor.GateLink.RootToTor.findcoincidencesRoot2Numpy module
      • GenerateCoincidencesAndAnhnilationsPositions
        • GenerateCoincidencesAndAnhnilationsPositions.findCoincidences()
        • GenerateCoincidencesAndAnhnilationsPositions.findCoincidencesBigArrays()
        • GenerateCoincidencesAndAnhnilationsPositions.findCoincidencesTrueEventID()
        • GenerateCoincidencesAndAnhnilationsPositions.printCoincidenceStats()
        • GenerateCoincidencesAndAnhnilationsPositions.readCoincidencesNumpyRecordsArray()
        • GenerateCoincidencesAndAnhnilationsPositions.saveCoincidencesAsNumpyRecordsArray()
        • GenerateCoincidencesAndAnhnilationsPositions.saveCoincidencesAsRootFile()
    • toor.GateLink.RootToTor.readroot module
      • ReadRootFile
        • ReadRootFile.doubleScannerFormat
        • ReadRootFile.partNumber
        • ReadRootFile.readRoot()
        • ReadRootFile.setArraysToConvert()
        • ReadRootFile.setDoubleScannerFormat()
        • ReadRootFile.setPartNumber()
        • ReadRootFile.singles
        • ReadRootFile.singlesScanner1
        • ReadRootFile.singlesScanner2
    • toor.GateLink.RootToTor.recreatedata module
    • toor.GateLink.RootToTor.rootToTor module
    • toor.GateLink.RootToTor.rootjoiner module
      • RootJoiner
        • RootJoiner.chooseJustFilteredData()
        • RootJoiner.globalArray
        • RootJoiner.globalArray_scanner1
        • RootJoiner.globalArray_scanner2
        • RootJoiner.join()
    • toor.GateLink.RootToTor.singlesstruct module
      • ExtractSingles
        • ExtractSingles._createAllTreeArrays()
        • ExtractSingles.runID()
        • ExtractSingles.setRunID()
        • ExtractSingles.eventID()
        • ExtractSingles.setEventID()
        • ExtractSingles.sourceID()
        • ExtractSingles.setSourceID()
        • ExtractSingles.sourcePosX()
        • ExtractSingles.setSourcePosX()
        • ExtractSingles.sourcePosY()
        • ExtractSingles.setSourcePosY()
        • ExtractSingles.sourcePosZ()
        • ExtractSingles.setSourcePosZ()
        • ExtractSingles.globalPosX()
        • ExtractSingles.setGlobalPosX()
        • ExtractSingles.globalPosY()
        • ExtractSingles.setGlobalPosY()
        • ExtractSingles.globalPosZ()
        • ExtractSingles.setGlobalPosZ()
        • ExtractSingles.time()
        • ExtractSingles.setTime()
        • ExtractSingles.energy()
        • ExtractSingles.setEnergy()
        • ExtractSingles.baseID()
        • ExtractSingles.setBaseID()
        • ExtractSingles.level1ID()
        • ExtractSingles.setLevel1ID()
        • ExtractSingles.level2ID()
        • ExtractSingles.setLevel2ID()
        • ExtractSingles.level3ID()
        • ExtractSingles.setLevel3ID()
        • ExtractSingles.level4ID()
        • ExtractSingles.setLevel4ID()
        • ExtractSingles.level5ID()
        • ExtractSingles.setLevel5ID()
        • ExtractSingles.comptonPhantom()
        • ExtractSingles.setComptonPhantom()
        • ExtractSingles.comptonCrystal()
        • ExtractSingles.setComptonCrystal()
        • ExtractSingles.comptonDetector()
        • ExtractSingles.setComptonDetector()
        • ExtractSingles.comptonWorld()
        • ExtractSingles.baseID
        • ExtractSingles.comptonCrystal
        • ExtractSingles.comptonPhantom
        • ExtractSingles.energy
        • ExtractSingles.eventID
        • ExtractSingles.globalPosX
        • ExtractSingles.globalPosY
        • ExtractSingles.globalPosZ
        • ExtractSingles.level1ID
        • ExtractSingles.level2ID
        • ExtractSingles.level3ID
        • ExtractSingles.level4ID
        • ExtractSingles.level5ID
        • ExtractSingles.parent
        • ExtractSingles.runID
        • ExtractSingles.setBaseID
        • ExtractSingles.setComptonCrystal
        • ExtractSingles.setComptonPhantom
        • ExtractSingles.setEnergy
        • ExtractSingles.setEventID
        • ExtractSingles.setGlobalPosX
        • ExtractSingles.setGlobalPosY
        • ExtractSingles.setGlobalPosZ
        • ExtractSingles.setLevel1ID
        • ExtractSingles.setLevel2ID
        • ExtractSingles.setLevel3ID
        • ExtractSingles.setLevel4ID
        • ExtractSingles.setLevel5ID
        • ExtractSingles.setRunID
        • ExtractSingles.setSourceID
        • ExtractSingles.setSourcePosX
        • ExtractSingles.setSourcePosY
        • ExtractSingles.setSourcePosZ
        • ExtractSingles.setTime
        • ExtractSingles.sourceID
        • ExtractSingles.sourcePosX
        • ExtractSingles.sourcePosY
        • ExtractSingles.sourcePosZ
        • ExtractSingles.time
    • toor.GateLink.RootToTor.validation_plots module
      • CoincidenceValidationPlots
        • CoincidenceValidationPlots.generateCharts()
    • Module contents
  • toor.GateLink.ToRToGate package
    • Submodules
    • toor.GateLink.ToRToGate.TorToGate module
    • Module contents

Module contents#

previous

toor.Device package

next

toor.GateLink.GateToTor package

On this page
  • Subpackages
  • Module contents

© Copyright 2025, Pedro Encarnação.

Created using Sphinx 7.4.7.

Built with the PyData Sphinx Theme 0.14.2.