toor package#
Subpackages#
- toor.AnalyticalReconstruction package
- toor.CalibrationWrapper package
- toor.Corrections package
- toor.Designer package
- Submodules
- toor.Designer.Image_vtk_projector_article module
SliceViewer
SliceViewer.MiceNaf()
SliceViewer.MouseMoveCallback()
SliceViewer.NemaIQ2008()
SliceViewer.addObservers()
SliceViewer.addViewportsNema()
SliceViewer.addVolumeRendering()
SliceViewer.createMovie()
SliceViewer.create_reslice()
SliceViewer.create_viewport()
SliceViewer.derenzo()
SliceViewer.maxValueForVolume()
SliceViewer.minValueForVolume()
SliceViewer.prepare_data()
SliceViewer.renderWindow()
SliceViewer.saveImageInPDF()
SliceViewer.save_screenshot()
SliceViewer.setAmbient()
SliceViewer.setColorMapLimits()
SliceViewer.setMaxValueForVolume()
SliceViewer.setSpecular()
SliceViewer.setVolumeRotation()
SliceViewer.setZoomVolume()
SliceViewer.wheelForwardCallback()
vtkTimerCallback
- toor.Designer.deviceDesigner module
- toor.Designer.geometricdesigner module
- toor.Designer.vtkrender module
- Module contents
- toor.DetectionLayout package
- toor.Device package
- Submodules
- toor.Device.device module
Device
Device.createDirectory()
Device.deviceDirectory
Device.deviceName
Device.deviceType
Device.deviceUUID
Device.energyResolutionFunction
Device.generateDeviceUUID()
Device.geometryObject
Device.geometryType
Device.getDeviceName()
Device.getFWHMSystemEnergyResponse()
Device.readDeviceProperties()
Device.setDeviceName()
Device.setDeviceType()
Device.setDeviceUUID()
Device.setEnergyResolutionFunction()
Device.setGeometryObject()
Device.setGeometryType()
- toor.Device.energy_resolution_function module
- toor.Device.storedeviceInfo module
- Module contents
- toor.GateLink package
- Subpackages
- toor.GateLink.GateToTor package
- toor.GateLink.RootToTor package
- Submodules
- toor.GateLink.RootToTor.addanglestorootfile module
- toor.GateLink.RootToTor.findcoincidencesRoot2Numpy module
- toor.GateLink.RootToTor.readroot module
- toor.GateLink.RootToTor.recreatedata module
- toor.GateLink.RootToTor.rootToTor module
- toor.GateLink.RootToTor.rootjoiner module
- toor.GateLink.RootToTor.singlesstruct module
- toor.GateLink.RootToTor.validation_plots module
- Module contents
- toor.GateLink.ToRToGate package
- Module contents
- Subpackages
- toor.Geometry package
- Subpackages
- toor.Geometry.LinearPET package
- toor.Geometry.Standard package
- toor.Geometry.dualRotationBased package
- Submodules
- toor.Geometry.dualRotationBased.dualrotation_pet_parametric_points module
- toor.Geometry.dualRotationBased.dualrotationct_parametric_points module
- toor.Geometry.dualRotationBased.dualrotationsystem module
- toor.Geometry.dualRotationBased.matrixgeometrycorrection module
- toor.Geometry.dualRotationBased.resetposition module
- Module contents
- Module contents
- Subpackages
- toor.ImageReader package
- Subpackages
- toor.ImageReader.DICOM package
- Submodules
- toor.ImageReader.DICOM.equipment module
- toor.ImageReader.DICOM.filesreader module
- toor.ImageReader.DICOM.frameofreference module
- toor.ImageReader.DICOM.image module
- toor.ImageReader.DICOM.patient module
- toor.ImageReader.DICOM.series module
- toor.ImageReader.DICOM.study module
- toor.ImageReader.DICOM.submodule module
- toor.ImageReader.DICOM.writeDicom module
- Module contents
- toor.ImageReader.Interfile package
- toor.ImageReader.RawData package
- toor.ImageReader.DICOM package
- Module contents
- Subpackages
- toor.Optimizer package
- Submodules
- toor.Optimizer.CPU module
- toor.Optimizer.GPUManager module
- toor.Optimizer.GaussianFileGenarator module
GaussianParameters
GaussianParameters.acceptableYDistance
GaussianParameters.acceptableZDistance
GaussianParameters.gaussian_y_fix_term
GaussianParameters.gaussian_z_fix_term
GaussianParameters.invert2timesigma_y_square
GaussianParameters.invert2timesigma_z_square
GaussianParameters.setShiftInvariantParameters()
GaussianParameters.setShiftVariantParameters()
GaussianParameters.sigma_y_square
GaussianParameters.sigma_z_square
- toor.Optimizer.gpu_multiple_kernel module
- toor.Optimizer.gpu_shared_memory module
- toor.Optimizer.kernelManager module
- toor.Optimizer.selectable_events module
- Module contents
- toor.Quantification package
- Submodules
- toor.Quantification.factor_calibration_phantom_uniform module
FactorQuantificationFromUniformPhantom
FactorQuantificationFromUniformPhantom.apply_quantification_factor_to_image()
FactorQuantificationFromUniformPhantom.calculation_radiotracer_factors()
FactorQuantificationFromUniformPhantom.load_info()
FactorQuantificationFromUniformPhantom.plt_segmented_image()
FactorQuantificationFromUniformPhantom.quantification_factor_calculation()
FactorQuantificationFromUniformPhantom.save_info()
FactorQuantificationFromUniformPhantom.segment_region_phantom()
- Module contents
- toor.TORFilesReader package
- Submodules
- toor.TORFilesReader.Radioisotope module
RadioisotopeInfo
RadioisotopeInfo.setTracers()
RadioisotopeInfo.setHalfLifes()
RadioisotopeInfo.setPositronFractions()
RadioisotopeInfo.setDecayFactor()
RadioisotopeInfo.setDecayTypes()
RadioisotopeInfo.setDecayEnergies()
RadioisotopeInfo.setDecayPercentage()
RadioisotopeInfo.setResidualActivity()
RadioisotopeInfo.setTotalDose()
RadioisotopeInfo.setRoute()
RadioisotopeInfo.setStartDate()
RadioisotopeInfo.setEndDate()
RadioisotopeInfo.setInjectionDateTime()
RadioisotopeInfo.setBatchCodeValue()
RadioisotopeInfo.setBatchCodingSchemeDesignator()
RadioisotopeInfo.setBatchCodingSchemeVersion()
RadioisotopeInfo.setBatchCodeMeaning()
RadioisotopeInfo.setBatchLongCodeValue()
RadioisotopeInfo.decayEnergies
RadioisotopeInfo.decayFactor
RadioisotopeInfo.decayPercentage
RadioisotopeInfo.decayTypes
RadioisotopeInfo.endDateTime
RadioisotopeInfo.halfLifes
RadioisotopeInfo.positronFractions
RadioisotopeInfo.residualActivity
RadioisotopeInfo.route
RadioisotopeInfo.setDecayEnergies()
RadioisotopeInfo.setDecayFactor()
RadioisotopeInfo.setDecayPercentage()
RadioisotopeInfo.setDecayTypes()
RadioisotopeInfo.setEndDate()
RadioisotopeInfo.setHalfLifes()
RadioisotopeInfo.setPositronFractions()
RadioisotopeInfo.setResidualActivity()
RadioisotopeInfo.setRoute()
RadioisotopeInfo.setStartDate()
RadioisotopeInfo.setTotalDose()
RadioisotopeInfo.setTracers()
RadioisotopeInfo.startDateTime
RadioisotopeInfo.totalDose
RadioisotopeInfo.tracers
- toor.TORFilesReader.scanning_body module
ListModeBody
ListModeBody.countsPerGlobalID
ListModeBody.frameStartIndexes
ListModeBody.generateStatistics()
ListModeBody.globalDetectorID
ListModeBody.indexCountsPerGlobalID
ListModeBody.listmode
ListModeBody.listmodeFields
ListModeBody.max
ListModeBody.mean
ListModeBody.median
ListModeBody.min
ListModeBody.minDiff
ListModeBody.numberOfEvents
ListModeBody.numberOfEventsPerFramePerSecond
ListModeBody.numberOfEventsPerSecond
ListModeBody.numberOfMotors
ListModeBody.printStatistics()
ListModeBody.regenerateStats()
ListModeBody.resetListmode()
ListModeBody.saveVarsToFile()
ListModeBody.setCountsPerGlobalID()
ListModeBody.setFrameStartIndexes()
ListModeBody.setGlobalDetectorID()
ListModeBody.setListModeHistogramHybridMode()
ListModeBody.setListmode()
ListModeBody.setListmodeFields()
ListModeBody.setMaxValues()
ListModeBody.setMeanValues()
ListModeBody.setMedianValues()
ListModeBody.setMinDiff()
ListModeBody.setMinValues()
ListModeBody.setNumberOfEvents()
ListModeBody.setNumberOfEventsPerFramePerSecond()
ListModeBody.setNumberOfEventsPerSecond()
ListModeBody.setNumberOfMotors()
ListModeBody.setStdValues()
ListModeBody.setUniqueValues()
ListModeBody.setUniqueValuesCount()
ListModeBody.std
ListModeBody.uniqueValues
ListModeBody.uniqueValuesCount
- toor.TORFilesReader.scanning_header module
AcquisitionInfo
AcquisitionInfo.date
AcquisitionInfo.frameOfReferenceUID
AcquisitionInfo.id
AcquisitionInfo.indexesOfFrames
AcquisitionInfo.instanceUID
AcquisitionInfo.numberOfFrames
AcquisitionInfo.radioisotope
AcquisitionInfo.scanType
AcquisitionInfo.setDate()
AcquisitionInfo.setFrameOfReferenceUID()
AcquisitionInfo.setId()
AcquisitionInfo.setIndexesOfFrames()
AcquisitionInfo.setInstanceUID()
AcquisitionInfo.setNumberOfFrames()
AcquisitionInfo.setRadioisotope()
AcquisitionInfo.setScanType()
AcquisitionInfo.setStudyInstanceUID()
AcquisitionInfo.setSubject()
AcquisitionInfo.setTecnhician()
AcquisitionInfo.studyInstanceUID
AcquisitionInfo.subject
AcquisitionInfo.tecnichian
- toor.TORFilesReader.subject_type module
- toor.TORFilesReader.technician module
- toor.TORFilesReader.torfiles module
- Module contents
Module contents#
Brief description of the file.